FigTree
FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures.
This application is available in Open OnDemand.
If necessary, upload your data onto the HPC. Or, if your files are small, you can upload them directly using Open OnDemand
Accessing FigTree on Open OnDemand#
- Log into Open OnDemand
- In the top navigation bar, select "Interactive Apps" and then from the drop down, "FigTree".
- Select the Slurm Account/partition that you want to use for your job. If you leave this blank, the app will run in our genacc_q account/partition.
- If necessary, alter the default job parameters. Otherwise, leave the default job parameters as is.
- Click "Launch" to queue your job.
- Once your interactive job has started, click Launch.
- A new tab will open, and the FigTree Application will launch shortly after.